شیوع ویروس بادنا -1 انجیر در استان فارس
کد مقاله : 2075-23IPPC
نویسندگان
1اصفهان امیریه مرکز تحقیقات کشاورزی
2دانشگاه شیراز
چکیده
بیماری موزاییک انجیر پراکنش جهانی دارد و مهمترین بیماری ویروسی انجیر در ایران و جهان به شمار می رود . هرچند بیماری موزاییک انجیر در ایران از سالها پیش گزارش شده است اما در سالهای اخیر اپیدمی ایجاد شده در انجیرستان های استان فارس به عنوان یکی از مناطق مهم انجیر کاری در ایران، اهمیت شناخت دقیق عوامل کمپلکس ایجاد کننده بیماری موزاییک انجیر را خاطر نشان کرده است. در تلاش برای شناسایی عوامل علیه این بیماری، چندین ویروس جدید از جمله یک ویروس دی ان ای دار در ایران و جهان شناسایی شده است. در این تحقیق بر اساس علائمی مانند لکه های رنگ پریده و حلقوی ، تغییر شکل برگها و انواع مختلف موزاییک همراه با لکه های نکروتیک، وجود ویروس FBV-1) fig Badna virus-1) از جنس Badnavirus و خانواده Caulimoviridae مورد بررسی قرار گرفت. تعداد بیست نمونه از پنج باغ به طور تصادفی جمع آوری گردید. این نمونه ها پس از استخراج دی ان ای (Dellaporta et al., 1983) با ازمون PCR بوسیله آغازگرهای580F/1650R توصیف شده توسط Laney و همکاران در سال 2012 ، مورد بررسی قرار گرفتند. از بیست نمونه مورد بررسی ،با تکثیر قطعه 1070 نوکلئوتیدی ،تعداد هجده نمونه آلودگی به ویروس FBV-1 را نشان دادند. پس از آن ژنوم کامل ویروس با استفاده از آغازگرهای تخصصی تعیین و با سایر بادنا ویروسهای گزارش شده از انجیر مورد مقایسه قرار گرفت. ژنوم ویروس شامل 7140 نوکلئوتید می باشد که دارای 99 درصد تشابه با جدایه های گزارش شده از امریکا و سایر جدایه های ایرانی که قبلا گزارش شده اند، می باشد.
کلیدواژه ها
موضوعات
Title
Fig BADNAVIRUS-1 is Prevalent in Fig Trees of Fars province
Authors
maryam Rastegar, alireza afsharifar, keramatolah izadpanah
Abstract
Abstract
Fig mosaic occurs worldwide and is the most common and important viral disease of fig. Although fig mosaic disease (FMD) has been recorded in Iran since some years ago, its high current incidence in fig orchards of Fars province, as one of the main fig production regions, alarms for better understanding of the viral complex associated with the disease. In the quest to identify the causal agent of the disease, several new viruses have been identified, including a new DNA virus from genus Badnavirus. The infected fig-trees showed different types of mosaic, chlorotic spots, ring spots ,malformation of leaves and necrotic symptoms. To unravel the virus or virus complex involved in FMD in Fars province, possible presence of Fig badnavirus-1 [FBV-1 (genus Badnavirus, family Caulimoviridae)] in infected trees of this region was assessed by PCR. Twenty leaf samples from five fig orchards were randomly collected and tested for the presence of FBV-1 using total DNA extracted from leaf samples (Dellaporta et al., 1983) and the primer pair 580F/1650R, described by Laney et al. (2012). Eighteen out of the twenty tested samples proved to be infected with FBV-1, as shown by amplification of a 1070 bp DNA fragment encompassing ORF1, ORF2 and ORF3 of the viral genome. The complete nucleotide sequence of FBV-1 was then determined by PCR using virus specific primers. The viral genome comprises 7140 nucleotides. It has a deduced genome organization typical for a member of the genus Badnavirus and the complete nucleotide sequence of FBV-1 analysis showed 99% nucleotide sequence homology with isolates from Arkansas (USA) and other isolates previously reported from other parts of IRAN.
Fig mosaic occurs worldwide and is the most common and important viral disease of fig. Although fig mosaic disease (FMD) has been recorded in Iran since some years ago, its high current incidence in fig orchards of Fars province, as one of the main fig production regions, alarms for better understanding of the viral complex associated with the disease. In the quest to identify the causal agent of the disease, several new viruses have been identified, including a new DNA virus from genus Badnavirus. The infected fig-trees showed different types of mosaic, chlorotic spots, ring spots ,malformation of leaves and necrotic symptoms. To unravel the virus or virus complex involved in FMD in Fars province, possible presence of Fig badnavirus-1 [FBV-1 (genus Badnavirus, family Caulimoviridae)] in infected trees of this region was assessed by PCR. Twenty leaf samples from five fig orchards were randomly collected and tested for the presence of FBV-1 using total DNA extracted from leaf samples (Dellaporta et al., 1983) and the primer pair 580F/1650R, described by Laney et al. (2012). Eighteen out of the twenty tested samples proved to be infected with FBV-1, as shown by amplification of a 1070 bp DNA fragment encompassing ORF1, ORF2 and ORF3 of the viral genome. The complete nucleotide sequence of FBV-1 was then determined by PCR using virus specific primers. The viral genome comprises 7140 nucleotides. It has a deduced genome organization typical for a member of the genus Badnavirus and the complete nucleotide sequence of FBV-1 analysis showed 99% nucleotide sequence homology with isolates from Arkansas (USA) and other isolates previously reported from other parts of IRAN.
Keywords
Fig mosaic disease, fig Badnavirus